miRBase entry: bta-mir-6523a

Stem-loop bta-mir-6523a


Accession
MI0022301
Description
Bos taurus bta-mir-6523a precursor miRNA


Sequence

174 reads, 11 reads per million, 56 experiments
acucugaacuUCUGGGGUAACUUUGAGCAGGGgaugaauuguauuucauacccugcucuaguguccccaguggggcagagua
((((((..((.((((((..(((..((((((((..((((......))))..)))))))).)))..)))))).))..)))))).

Structure
-      aa  U      UA   UU        ga    uu 
 acucug  cu CUGGGG  ACU  GAGCAGGG  ugaa  g
 ||||||  || ||||||  |||  ||||||||  ||||   
 ugagac  gg gacccc  uga  cucguccc  acuu  u
a      gg  u      ug   -u        au    ua 


Annotation confidence Not enough data
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Genome context
chr24: 46294907-46294988 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-6523a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-6523a

Accession MIMAT0025552
Description Bos taurus bta-miR-6523a mature miRNA
Sequence 11 - UCUGGGGUAACUUUGAGCAGGG - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026