miRBase entry: gga-mir-6559

Stem-loop gga-mir-6559


Accession
MI0022377
Description
Gallus gallus gga-mir-6559 precursor miRNA


Sequence

61 reads, 2 reads per million, 3 experiments
aaugugccuuaggaaagggaauggguUGGGAGAAAGAGUCAUUACCUGAcuucuuguuaucgggcuucAGAGUUGACUCUUCCUUGCAGUucuuggcgagcagaacuua
....(.((((....)))).).......(.(((.((((((((..((((((...((((....))))..)))).)))))))))).))).)((((((.(.....)))))))..

Structure
aaugugccuuaggaaagggaauggguU G   A        UU  -    cuu    u 
                           G GAG AAGAGUCA  AC CUGA   cuug u
                           | ||| ||||||||  || ||||   ||||  
                           C UUC UUCUCAGU  UG GAcu   gggc a
-----auucaagacgagcgguucuUGA G   C        --  A    -uc    u 


Annotation confidence Not enough data
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Genome context
chr1: 133113085-133113193 [-]

Database links

Mature gga-miR-6559-5p

Accession MIMAT0025625
Description Gallus gallus gga-miR-6559-5p mature miRNA
Sequence 27 - UGGGAGAAAGAGUCAUUACCUGA - 49
Evidence experimental
Illumina [1]

Mature gga-miR-6559-3p

Accession MIMAT0025626
Description Gallus gallus gga-miR-6559-3p mature miRNA
Sequence 69 - AGAGUUGACUCUUCCUUGCAGU - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227