miRBase entry: gga-mir-6575

Stem-loop gga-mir-6575


Accession
MI0022393
Description
Gallus gallus gga-mir-6575 precursor miRNA


Sequence

cucugcuaggcagaauccuuugguuUUGUCAGCUUGGGGAAGCUCUUuggagcguuuugaaaggcagGAGUUUUCCCAGGCUGAUGUCAcuagaagauuccuguagau
.(((((.(((...((((.((((((..(((((((((((((((((((((....((.((....)).)))))))))))))))))))))))..)))))).)))))))))))).

Structure
c     u   cag    c      uU                     ugga  g  u 
 ucugc agg   aauc uuuggu  UGUCAGCUUGGGGAAGCUCUU    gc uu u
 ||||| |||   |||| ||||||  |||||||||||||||||||||    || ||  
 agaug ucc   uuag agaucA  GUAGUCGGACCCUUUUGAGga    cg aa g
u     -   ---    a      CU                     ----  g  a 


Annotation confidence Not enough data
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Genome context
chr10: 2623651-2623758 [-]

Database links

Mature gga-miR-6575-5p

Accession MIMAT0025657
Description Gallus gallus gga-miR-6575-5p mature miRNA
Sequence 26 - UUGUCAGCUUGGGGAAGCUCUU - 47
Evidence experimental
Illumina [1]

Mature gga-miR-6575-3p

Accession MIMAT0025658
Description Gallus gallus gga-miR-6575-3p mature miRNA
Sequence 68 - GAGUUUUCCCAGGCUGAUGUCA - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227