Stem-loop gga-mir-6577

Accession

MI0022395

Description

Gallus gallus gga-mir-6577 precursor miRNA

Sequence

gggcauccccaaacuccuggCAUCUUCUACUCUGUUUUCUUCUguguucaauacacaugcagaAGAGACUGGGUAUAGGAGGGUggagaucugggaaacuccuuuucc
(((..((((....((((...(.((((.(((((.((((.(((((((((.........))))))))))))).))))).)))))...))))....))))..))).......

Structure

-------   ca    caaa    ugg A    C     U    U         uca 
       ggg  uccc    cucc   C UCUU UACUC GUUU CUUCUgugu   a
       |||  ||||    ||||   | |||| ||||| |||| |||||||||   u
       cuc  aggg    gagg   G AGGA AUGGG CAGA GAagacgua   a
ccuuuuc   aa    ucua    UGG -    U     U    -         cac 

Annotation confidence Low

Genome context

chr6: 17227036-17227143 [+]

Mature gga-miR-6577-5p

• Accession: MIMAT0025661
• Description: Gallus gallus gga-miR-6577-5p mature miRNA
• Sequence: 21 - CAUCUUCUACUCUGUUUUCUUCU - 43
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6577-3p

• Accession: MIMAT0025662
• Description: Gallus gallus gga-miR-6577-3p mature miRNA
• Sequence: 64 - AGAGACUGGGUAUAGGAGGGU - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227