miRBase entry: gga-mir-6584

Stem-loop gga-mir-6584


Accession
MI0022404
Description
Gallus gallus gga-mir-6584 precursor miRNA


Sequence

4 reads, 1 reads per million, 3 experiments
gcaaaaaggcaaaggcagcacaccaUCUGGAAGUUCUGCAGAUGAUGAuaccuuuucuucgucaucugcuccaauaacuuucaaagaugugcgagcucaaagaccucuga
......((((...(((.(((((.....((((((((..(((((((((((..........)))))))))))......))))))))....)))))..)))....).)))....

Structure
gcaaaa   - -aaa   -a     ccaUC        ----CU           uacc 
      agg c    ggc  gcaca     UGGAAGUU      GCAGAUGAUGA    u
      ||| |    |||  |||||     ||||||||      |||||||||||     
      ucc g    ucg  cgugu     acuuucaa      cgucuacugcu    u
--aguc   a aaac   ag     -agaa        uaaccu           ucuu 


Annotation confidence Not enough data
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Genome context
chr2: 93858571-93858680 [-]

Database links

Mature gga-miR-6584-5p

Accession MIMAT0025675
Description Gallus gallus gga-miR-6584-5p mature miRNA
Sequence 26 - UCUGGAAGUUCUGCAGAUGAUGA - 48
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227