miRBase entry: gga-mir-6586

Stem-loop gga-mir-6586


Accession
MI0022406
Description
Gallus gallus gga-mir-6586 precursor miRNA


Sequence

2 reads, 1 reads per million, 2 experiments
ugggcugacugugguuucuaaccaguUGCUGCCAGAUAGAAGUUCACCUuuuccuauagcuuggguggcuuccauaugguauggagcugguuuuugaggauuaccuuucc
..........((((((((.((((((((.((((((.((.(((((.(((((.............)))))))))).)).))))).).))))))))...)).))))))......

Structure
ugggcugacu      -  --u        G -     G  A     U     uuucc 
          gugguu uc   aaccaguU C UGCCA AU GAAGU CACCU     u
          |||||| ||   |||||||| | ||||| || ||||| |||||     a
          cauuag ag   uuggucga g auggu ua cuucg guggg     u
----ccuuuc      g  uuu        g u     a  c     -     uucga 


Annotation confidence Not enough data
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Genome context
chr4: 69449240-69449349 [-]

Database links

Mature gga-miR-6586-5p

Accession MIMAT0025677
Description Gallus gallus gga-miR-6586-5p mature miRNA
Sequence 27 - UGCUGCCAGAUAGAAGUUCACCU - 49
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227