miRBase entry: gga-mir-6594

Stem-loop gga-mir-6594


Accession
MI0022414
Description
Gallus gallus gga-mir-6594 precursor miRNA


Sequence

7 reads, 0 reads per million, 3 experiments
ucugcuuugcaccacaggguUGGGGGUGGCGUGAGUUGUGGcugggcuuuggugcccacucucagcucaugucaucccacagggugaugcacaggaggggcacuaugggg
(((.((.((((.(((...((..((((((((((((((((.((.(((((......))))).)).))))))))))))))))))...))).)))).)).)))............

Structure
------------   g  u    c   agg  UG                U  c     uu 
            ucu cu ugca cac   gu  GGGGUGGCGUGAGUUG GG ugggc  u
            ||| || |||| |||   ||  |||||||||||||||| || |||||   
            gga ga acgu gug   ca  cccuacuguacucgac cu acccg  g
gggguaucacgg   g  c    a   gga  --                u  c     ug 


Annotation confidence Not enough data
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Genome context
chr4: 598336-598445 [+]

Database links

Mature gga-miR-6594-5p

Accession MIMAT0025688
Description Gallus gallus gga-miR-6594-5p mature miRNA
Sequence 21 - UGGGGGUGGCGUGAGUUGUGG - 41
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227