miRBase entry: gga-mir-6605

Stem-loop gga-mir-6605


Accession
MI0022424
Description
Gallus gallus gga-mir-6605 precursor miRNA


Sequence

uacauuacugauauucuuuucugggACUGCAGAGCUUCUUGAACAAGAuagcauaugucagcuuguugagaauuucugcauuccaguuuagccuuuugugcccauauuuu
.....(((.((....((...((((((.(((((((.(((((.((((((...((....))...))))))))))).)))))))))))))...))...)).)))..........

Structure
-----uacau   u  uauu  uuu      C       C     G      Aua  a 
          uac ga    cu   cugggA UGCAGAG UUCUU AACAAG   gc u
          ||| ||    ||   |||||| ||||||| ||||| ||||||   ||  
          gug uu    ga   gaccuu acgucuu aagag uuguuc   ug a
uuuuauaccc   u  -ucc  uuu      -       u     -      gac  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3: 84548705-84548814 [-]

Database links

Mature gga-miR-6605-5p

Accession MIMAT0025699
Description Gallus gallus gga-miR-6605-5p mature miRNA
Sequence 26 - ACUGCAGAGCUUCUUGAACAAGA - 48
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227