miRBase entry: gga-mir-6619

Stem-loop gga-mir-6619


Accession
MI0022438
Description
Gallus gallus gga-mir-6619 precursor miRNA


Sequence

gcaaagcgcuggggagccccgAGGAGAAGUGACGGAGCAGUGCcaaugccccccuccccgcauugacguccguuuauuucuccccagcacaaaugacguguggcguggau
.....((((((((....)))(.(((((((((((((((((((((................)))))).).)))).)))))))))).).((((.......)))))))))....

Structure
gcaaa     ------ggggagcccc A          -    - -      caaugcc 
     gcgcu                g GGAGAAGUGA CGGA G CAGUGC       c
     |||||                | |||||||||| |||| | ||||||        
     ugcgg                c ccucuuuauu gccu c guuacg       c
-uagg     ugugcaguaaacacga c          u    g a      ccccucc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
AADN04005953.1: 4248-4357 [-]

Database links

Mature gga-miR-6619-5p

Accession MIMAT0025715
Description Gallus gallus gga-miR-6619-5p mature miRNA
Sequence 22 - AGGAGAAGUGACGGAGCAGUGC - 43
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227