miRBase entry: gga-mir-6623

Stem-loop gga-mir-6623


Accession
MI0022442
Description
Gallus gallus gga-mir-6623 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
augauguaucugcugguuugagcuagaaaagcugauccuucagcucagugauaaaucacuuccauucACAGCUGGAGACCAUCUUUUCAagcccagauuggcuuaucuuc
...........(((((((((.(((.((((((.((.((.(((((((..((((..............))))))))))))).)).)))))).))).)))))))))........

Structure
augauguaucu         a   a      c  a  c       ca    uaaauc 
           gcugguuug gcu gaaaag ug uc uucagcu  guga      a
           ||||||||| ||| |||||| || || |||||||  ||||       
           cgguuagac cga CUUUUC AC AG AGGUCGA  CAcu      c
---cuucuauu         c   A      U  C  -       --    uaccuu 


Annotation confidence Not enough data
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Genome context
chr8: 24695552-24695661 [-]

Database links

Mature gga-miR-6623-3p

Accession MIMAT0025719
Description Gallus gallus gga-miR-6623-3p mature miRNA
Sequence 68 - ACAGCUGGAGACCAUCUUUUCA - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227