miRBase entry: gga-mir-6624

Stem-loop gga-mir-6624


Accession
MI0022443
Description
Gallus gallus gga-mir-6624 precursor miRNA


Sequence

cccccccccccccaguguccccugcugcagaagcucccacugaggcaacacaggcagcacuggcUCCAGGGAAGGGCUUCUGUUUgcagaacacaacugcucugauuaca
..............((((...((((.((((((((((((.(((.(((....(((......)))))).)))))..))))))))))..)))).))))................

Structure
--ccccccccccccca    ccc    -u          --  a   a   aaca   gc 
                gugu   cugc  gcagaagcuc  cc cug ggc    cag  a
                ||||   ||||  ||||||||||  || ||| |||    |||   
                caca   gacg  UGUCUUCGGG  GG GAC Ucg    guc  g
acauuagucucgucaa    --a    UU          AA  -   C   ----   ac 


Annotation confidence Not enough data
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Genome context
chr7: 16321986-16322095 [+]

Database links

Mature gga-miR-6624-3p

Accession MIMAT0025720
Description Gallus gallus gga-miR-6624-3p mature miRNA
Sequence 65 - UCCAGGGAAGGGCUUCUGUUU - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227