miRBase entry: gga-mir-6626

Stem-loop gga-mir-6626


Accession
MI0022445
Description
Gallus gallus gga-mir-6626 precursor miRNA


Sequence

4 reads, 0 reads per million, 2 experiments
cuguagcccgcauaaagcaaagugcuaAGGAGAGAGAAGGGUUGCUguacucaagccugcuuuccuuucucccuccaggcuaguagugaguucuuuagaagcgcuggaaa
...(((((.((.....))...).)))).((((((((.(((((.(((.......)))..))))).)))))))).((((((((..(((........)))..))).)))))..

Structure
----------cuguagcccgcauaaagcaaagugcuaA        A     -U   gu 
                                      GGAGAGAG AGGGU  GCU  a
                                      |||||||| |||||  |||  c
                                      ccucuuuc uuucg  cga  u
aaaggucgcgaagauuucuugagugaugaucggaccuc        c     uc   ac 


Annotation confidence Not enough data
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Genome context
chr21: 4626344-4626453 [-]

Database links

Mature gga-miR-6626-5p

Accession MIMAT0025722
Description Gallus gallus gga-miR-6626-5p mature miRNA
Sequence 28 - AGGAGAGAGAAGGGUUGCU - 46
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227