miRBase entry: gga-mir-6640

Stem-loop gga-mir-6640


Accession
MI0022459
Description
Gallus gallus gga-mir-6640 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
aauguugguaauuauuuuaUCUGGAAUUGUAGUAGAGUGUAUuauuauggcaugugccuaauggcucuacugcuuucuugucaggugauaugaaggacgacacgacggac
..(((((....((((.((((((((....((((((((((....(((((.(((....)))))))))))))))))).......)))))))).))))....)))))........

Structure
------aa     guaa    u        ---AAUU          GUAU     u   a 
        uguug    uuau uuaUCUGG       GUAGUAGAGU    uauua ggc u
        |||||    |||| ||||||||       ||||||||||    ||||| |||  
        acagc    agua aguggacu       cgucaucucg    guaau ccg g
caggcagc     agga    u        guucuuu          ----     -   u 


Annotation confidence Not enough data
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Genome context
chr3: 22223149-22223258 [+]

Database links

Mature gga-miR-6640-5p

Accession MIMAT0025736
Description Gallus gallus gga-miR-6640-5p mature miRNA
Sequence 20 - UCUGGAAUUGUAGUAGAGUGUAU - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227