miRBase entry: gga-mir-6655

Stem-loop gga-mir-6655


Accession
MI0022475
Description
Gallus gallus gga-mir-6655 precursor miRNA


Sequence

aaauuggugcccaggugguUCUGCUAGGAGGCUGUGUAUCCUgggugccagcaggauagcagugcccuaguaguggcauuggguguccacugcaugggggucuucuccau
....((((((((((.((.(.((((((((..(((((.(((((((........))))))))))))..)))))))).).))))))))).)))....((((((.....))))))

Structure
-----------------aaau   -       g  g U        AG     G       ggu 
                     ugg ugcccag ug u CUGCUAGG  GCUGU UAUCCUg   g
                     ||| ||||||| || | ||||||||  ||||| |||||||    
                     acc guggguu ac g gaugaucc  ugacg auaggac   c
uaccucuucuggggguacguc   u       -  g u        cg     -       gac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3: 97164290-97164399 [+]

Database links

Mature gga-miR-6655-5p

Accession MIMAT0025756
Description Gallus gallus gga-miR-6655-5p mature miRNA
Sequence 20 - UCUGCUAGGAGGCUGUGUAUCCU - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227