miRBase entry: gga-mir-6656

Stem-loop gga-mir-6656


Accession
MI0022476
Description
Gallus gallus gga-mir-6656 precursor miRNA


Sequence

2 reads, 0 reads per million, 2 experiments
aaggcagccccagaggguggagggaUGCAGGGCGAGUAGAGAAAGGCAUcuuacaucuccucgguggcuugcucuggggcccgcauccuugugccuuccuuuaguuugcu
..((((((....(((((((.((((((((.((((...(((((.(((.((((............)))).))).)))))..)))))))))))).))))))).....).)))))

Structure
aa     - -ccca       g        A    GAG     A   G    uuaca 
  ggcag c     gagggug agggaUGC GGGC   UAGAG AAG CAUc     u
  ||||| |     ||||||| |||||||| ||||   ||||| ||| ||||      
  ucguu g     cuuccgu uuccuacg cccg   gucuc uuc gugg     c
--     u auuuc       g        -    -gg     g   g    cuccu 


Annotation confidence Not enough data
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Genome context
chr1: 175931282-175931391 [-]

Database links

Mature gga-miR-6656-5p

Accession MIMAT0025757
Description Gallus gallus gga-miR-6656-5p mature miRNA
Sequence 26 - UGCAGGGCGAGUAGAGAAAGGCAU - 49
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227