miRBase entry: gga-mir-6657

Stem-loop gga-mir-6657


Accession
MI0022477
Description
Gallus gallus gga-mir-6657 precursor miRNA


Sequence

agggaaaucaggcucgcugcugcugcccccucuuucaccagggucugguuuguacuguguuggACAUGGUGGGAGAAGGGUGACcagcacacugagcugaugauccuacu
.((((.(((((.((((.((.(((((((((.((((((((((..(((((((....))).....)))).)))))))))).))).)..))))))).)))))))))..))))...

Structure
--a    -a     g    c  c     -- -   c          gg    -----   u 
   ggga  aucag cucg ug ugcug  c ccc ucuuucacca  gucu     ggu u
   ||||  ||||| |||| || |||||  | ||| ||||||||||  ||||     |||  
   uccu  uaguc gagu ac acgac  G GGG AGAGGGUGGU  CAgg     uca g
uca    ag     -    c  -     CA U   A          -A    uugug   u 


Annotation confidence Not enough data
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Genome context
chr6: 20059129-20059238 [+]

Database links

Mature gga-miR-6657-3p

Accession MIMAT0025758
Description Gallus gallus gga-miR-6657-3p mature miRNA
Sequence 64 - ACAUGGUGGGAGAAGGGUGAC - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227