miRBase entry: gga-mir-6661

Stem-loop gga-mir-6661


Accession
MI0022481
Description
Gallus gallus gga-mir-6661 precursor miRNA


Sequence

12 reads, 0 reads per million, 3 experiments
gagucacuggaagcaguucAGGGCUGCAGCAUGCAGAAGCUgugugcugugacagcaucuggaugcugcaggcaucccacuaccuccuuggcacagcugcugcccugagg
.....((((....))))(((((((((((((((.((((.(((((........))))).)))).))))))))((....))...........((((....)))))))))))..

Structure
gagucacuggaagcagu       -------------------------------        G    A     gug 
                 ucAGGGC                               UGCAGCAU CAGA GCUgu   c
                 |||||||                               |||||||| |||| |||||    
                 agucccg                               acgucgua gucu cgaca   u
---------------gg       ucgucgacacgguuccuccaucacccuacgg        g    a     gug 


Annotation confidence Not enough data
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Genome context
chr4: 83231971-83232080 [+]

Database links

Mature gga-miR-6661-5p

Accession MIMAT0025762
Description Gallus gallus gga-miR-6661-5p mature miRNA
Sequence 20 - AGGGCUGCAGCAUGCAGAAGCU - 41
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227