Stem-loop gga-mir-6664

Accession

MI0022484

Description

Gallus gallus gga-mir-6664 precursor miRNA

Sequence

11 reads, 3 reads per million, 4 experiments

auuccugagugggauggcaacuuucccgagccuccaccaucaagccuugugcuggccaccagagggacuCAGGAAUGGUGCUGGAGGCUGAgggcauuguugcagagggu
(((((.....))))).(((((..((((.((((((((.(((((..(((.((.((..........)).))..)))..))))).))))))))..))).)..))))).......

Structure

auuccugagugggaug     uu -   -g        c     ag   -u  g  ggcc 
                gcaac  u ccc  agccucca cauca  ccu  gu cu    a
                |||||  | |||  |||||||| |||||  |||  || ||     
                cguug  a ggg  UCGGAGGU GUGGU  GGA  ca gg    c
---------ugggaga     uu c   AG        C     AA   Cu  g  agac 

Annotation confidence Not enough data

Genome context

chr20: 640878-640987 [-]

Mature gga-miR-6664-3p

• Accession: MIMAT0025765
• Description: Gallus gallus gga-miR-6664-3p mature miRNA
• Sequence: 70 - CAGGAAUGGUGCUGGAGGCUGA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227