miRBase entry: gga-mir-6665

Stem-loop gga-mir-6665


Accession
MI0022485
Description
Gallus gallus gga-mir-6665 precursor miRNA


Sequence

2 reads, 0 reads per million, 2 experiments
cuccaaaaaucgagaucugcaaagcUGCCUGAAGGAUUUUGAUGCCCugaaaugaagggaaagaaagggcugucugaguccuccaggccggguuuuguuuaucucagucc
...........(((((..(((((((((((((.(((((((.((((((((.................))))).))).))))))).)))))..))))))))..))))).....

Structure
cuccaaaaauc     cu        --     A       U   -     gaaauga 
           gagau  gcaaagcU  GCCUG AGGAUUU GAU GCCCu       a
           |||||  ||||||||  ||||| ||||||| ||| |||||       g
           cucua  uguuuugg  cggac uccugag cug cggga       g
------ccuga     uu        gc     c       u   u     aagaaag 


Annotation confidence Not enough data
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Genome context
chr8: 5229603-5229712 [-]

Database links

Mature gga-miR-6665-5p

Accession MIMAT0025766
Description Gallus gallus gga-miR-6665-5p mature miRNA
Sequence 26 - UGCCUGAAGGAUUUUGAUGCCC - 47
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227