miRBase entry: gga-mir-6668

Stem-loop gga-mir-6668


Accession
MI0022488
Description
Gallus gallus gga-mir-6668 precursor miRNA


Sequence

2 reads, 2 reads per million, 1 experiments
ugggugauccuguuggucuuuucuaaccauggugauucaaugauucuaugauguguugccaUGGAAUCGUGGAAUAGCUUGGGUuggaaggcaccugaaugcccacccag
((((((........(((.((((((((((..(((.((((.(((((((((((.........))))))))))).)))).)))..)))))))))).)))........)))))).

Structure
-      auccuguu   c          au   g    a           aug 
 ugggug        ggu uuuucuaacc  ggu auuc augauucuaug   u
 ||||||        ||| ||||||||||  ||| |||| |||||||||||   g
 acccac        cca ggaagguUGG  UCG UAAG UGCUAAGGUac   u
g      ccguaagu   c          GU   A    G           cgu 


Annotation confidence Not enough data
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Genome context
chr4: 34288536-34288645 [+]

Database links

Mature gga-miR-6668-3p

Accession MIMAT0025769
Description Gallus gallus gga-miR-6668-3p mature miRNA
Sequence 62 - UGGAAUCGUGGAAUAGCUUGGGU - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227