miRBase entry: gga-mir-6671

Stem-loop gga-mir-6671


Accession
MI0022491
Description
Gallus gallus gga-mir-6671 precursor miRNA


Sequence

2 reads, 0 reads per million, 2 experiments
gcggaaggaaagcagcauugcagccUGUCCUGGAGUCUCGUGCACACgugcaaacacucaggugugcucaccacugcaggaacugcugcaagguuugcagaccagagcuc
((....((...(((((.(((((((...(((((.(((...(.((((((.((........)).)))))).)...))).)))))...))))))).).))))...))...))..

Structure
--  ggaa  aaa    - a       cUG     G   CUC U      g  caa 
  gc    gg   gcag c uugcagc   UCCUG AGU   G GCACAC ug   a
  ||    ||   |||| | |||||||   ||||| |||   | |||||| ||    
  cg    cc   cguu g aacgucg   aggac uca   c cgugug ac   c
cu  -aga  aga    u g       uca     g   cca u      g  uca 


Annotation confidence Not enough data
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Genome context
chr24: 5039305-5039414 [+]

Database links

Mature gga-miR-6671-5p

Accession MIMAT0025773
Description Gallus gallus gga-miR-6671-5p mature miRNA
Sequence 26 - UGUCCUGGAGUCUCGUGCACAC - 47
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227