miRBase entry: gga-mir-6701

Stem-loop gga-mir-6701


Accession
MI0022523
Description
Gallus gallus gga-mir-6701 precursor miRNA


Sequence

7 reads, 0 reads per million, 3 experiments
caaauccuuccaauaggccagaugagugaagugaucugccugcaaaguaccccgggaaacaaaaacaggAUUAUUUUACAGACAGAUCGCuuuccucagccagcucaccc
...............(((....((((.(((((((((((.(((.((((((..((.(..........).))..)))))).))).))))))))))).))))))).........

Structure
caaauccuuccaaua   caga    u           c   c      cc  g gaaa 
               ggc    ugag gaagugaucug cug aaagua  cc g    c
               |||    |||| ||||||||||| ||| ||||||  || |     
               ccg    acuc uuuCGCUAGAC GAC UUUUAU  gg c    a
------cccacucga   ----    c           A   A      UA  a aaaa 


Annotation confidence Not enough data
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Genome context
chr2: 97511155-97511264 [-]

Database links

Mature gga-miR-6701-3p

Accession MIMAT0025811
Description Gallus gallus gga-miR-6701-3p mature miRNA
Sequence 70 - AUUAUUUUACAGACAGAUCGC - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227