Stem-loop cln-MIR162

Accession

MI0022566

Description

Cunninghamia lanceolata cln-MIR162 precursor miRNA

Gene family

MIPF0000127; MIR162_1

Sequence

uuaacuggaggcaggguuuuauccaucccuuccuguuacugauuuaaggcucugcucacaauuaacugcaguuaacaggcacgggUUGAUAAACCUCUGCAUCCAGuuugg
..(((((((.((((((.((((((.((((...(((((((((((.(((((((...))).....)))).).))).)))))))...)))).)))))).)))))).)))))))...

Structure

-uu       g      u      c    cuu       -   - u    -----   u 
   aacugga gcaggg uuuauc aucc   ccuguua cug a uuaa     ggc  
   ||||||| |||||| |||||| ||||   ||||||| ||| | ||||     ||| c
   uuGACCU CGUCUC AAAUAG Uggg   ggacaau gac u aauu     ucg  
ggu       A      C      U    cac       u   g c    aacac   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature cln-miR162

• Accession: MIMAT0027348
• Description: Cunninghamia lanceolata cln-miR162 mature miRNA
• Sequence: 86 - UUGAUAAACCUCUGCAUCCAG - 106
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22894611
   Identification and characterization of small non-coding RNAs from Chinese fir by high throughput sequencing
   Wan LC, Wang F, Guo X, Lu S, Qiu Z, Zhao Y, Zhang H, Lin J
   BMC Plant Biol (2012) 12:146