miRBase entry: mmu-mir-6954

Stem-loop mmu-mir-6954


Accession
MI0022801
Symbol
MGI: Mir6954
Description
Mus musculus mmu-mir-6954 precursor miRNA


Sequence

76 reads, 8 reads per million, 33 experiments
uacucUGGGGCAGUUCUGGGGGCAGAUaugcaaaccuccUGCAGCCAGCUCUUCCCCUAG
......((((.((..((((..((((.............))))..))))..)).))))...

Structure
uacucU    C  UU    GG    AUaug 
      GGGG AG  CUGG  GCAG     c
      |||| ||  ||||  ||||     a
      CCCC UC  GACC  CGUc     a
---GAU    U  UC    GA    cucca 


Annotation confidence Not enough data
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Genome context
chr15: 76433214-76433273 [+]

Database links

Mature mmu-miR-6954-5p

Accession MIMAT0027808
Description Mus musculus mmu-miR-6954-5p mature miRNA
Sequence 6 - UGGGGCAGUUCUGGGGGCAGAU - 27
Evidence experimental
meta-analysis [1]

Mature mmu-miR-6954-3p

Accession MIMAT0027809
Description Mus musculus mmu-miR-6954-3p mature miRNA
Sequence 40 - UGCAGCCAGCUCUUCCCCUAG - 60
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645