miRBase entry: mmu-mir-6973a

Stem-loop mmu-mir-6973a


Accession
MI0022821
Symbol
MGI: Mir6973a
Description
Mus musculus mmu-mir-6973a precursor miRNA


Sequence

178 reads, 7 reads per million, 25 experiments
ggcucUACGGUGGGAGGGGUGGAGUUGccauuagccaaaucugaccucugggCACUCUAACCCUACCUACCCAUccag
........((((((((((..(((((.(((...((.((....))..))...))))))))..)))).)))))).......

Structure
ggcucUAC      -    GU     U   auu  -c  a 
        GGUGGG AGGG  GGAGU Gcc   ag  ca a
        |||||| ||||  ||||| |||   ||  ||  
        CCAUCC UCCC  UCUCA Cgg   uc  gu u
-gaccUAC      A    AA     -   guc  ca  c 


Annotation confidence Not enough data
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Genome context
chr17: 35194972-35195049 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-6973a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-6973a-5p

Accession MIMAT0027848
Description Mus musculus mmu-miR-6973a-5p mature miRNA
Sequence 6 - UACGGUGGGAGGGGUGGAGUUG - 27
Evidence experimental
meta-analysis [1]

Mature mmu-miR-6973a-3p

Accession MIMAT0027849
Description Mus musculus mmu-miR-6973a-3p mature miRNA
Sequence 53 - CACUCUAACCCUACCUACCCAU - 74
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645