miRBase entry: mmu-mir-7000

Stem-loop mmu-mir-7000


Accession
MI0022848
Symbol
MGI: Mir7000
Description
Mus musculus mmu-mir-7000 precursor miRNA


Sequence

22 reads, 2 reads per million, 7 experiments
agaggAGGGGACAGGUAUCUGGACAGAgguucugcccucagCACCCACCUGCCUGUCCUCCAG
......(((((((((((..(((.(.((((......)))).)...)))..)))))))))))...

Structure
agaggA           UC   --A A    uu 
      GGGGACAGGUA  UGG   C GAgg  c
      |||||||||||  |||   | ||||   
      CUCCUGUCCGU  ACC   g cucc  u
---GAC           CC   CAC a    cg 


Annotation confidence Not enough data
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Genome context
chr2: 92387384-92387446 [-]

Database links

Mature mmu-miR-7000-5p

Accession MIMAT0027902
Description Mus musculus mmu-miR-7000-5p mature miRNA
Sequence 6 - AGGGGACAGGUAUCUGGACAGA - 27
Evidence experimental
meta-analysis [1]

Mature mmu-miR-7000-3p

Accession MIMAT0027903
Description Mus musculus mmu-miR-7000-3p mature miRNA
Sequence 42 - CACCCACCUGCCUGUCCUCCAG - 63
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645