miRBase entry: mmu-mir-7009

Stem-loop mmu-mir-7009


Accession
MI0022858
Symbol
MGI: Mir7009
Description
Mus musculus mmu-mir-7009 precursor miRNA


Sequence

26 reads, 132 reads per million, 18 experiments
cccuuUUGGGGUCAGGGGACCAGAGCUccagugacccugucucUCUUUUCCCCUCUCCCUGCAG
.......((((..((((((..((((...(((.....)))...))))..))))))..))))....

Structure
cccuuUU    UC      CC    CUc   u 
       GGGG  AGGGGA  AGAG   cag g
       ||||  ||||||  ||||   ||| a
       UCCC  UCCCCU  UCUc   guc c
---GACG    UC      UU    ucu   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3: 36475461-36475524 [-]

Database links

Mature mmu-miR-7009-5p

Accession MIMAT0027922
Description Mus musculus mmu-miR-7009-5p mature miRNA
Sequence 6 - UUGGGGUCAGGGGACCAGAGCU - 27
Evidence experimental
meta-analysis [1]

Mature mmu-miR-7009-3p

Accession MIMAT0027923
Description Mus musculus mmu-miR-7009-3p mature miRNA
Sequence 44 - UCUUUUCCCCUCUCCCUGCAG - 64
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645