miRBase entry: mmu-mir-7039

Stem-loop mmu-mir-7039


Accession
MI0022888
Symbol
MGI: Mir7039
Description
Mus musculus mmu-mir-7039 precursor miRNA


Sequence

64 reads, 10 reads per million, 26 experiments
ucguuAGAGGGAUGGAGAGCAUCGCGUguuugagucuugugacacuuccauaauguuuccacgCCUGUUCUGCCCUCCCUUCCAG
......((((((.((((((((..(((((...(((.((((((.......))))).).)))))))).)))))).)).))))))....

Structure
ucguuA      U  -      UC     uuu   u -     ac 
      GAGGGA GG AGAGCA  GCGUg   gag c uugug  a
      |||||| || ||||||  |||||   ||| | |||||  c
      UUCCCU CC UCUUGU  Cgcac   cuu g aauac  u
--GACC      C  G      -C     ---   u u     cu 


Annotation confidence Not enough data
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Genome context
chr5: 144896732-144896816 [-]

Database links

Mature mmu-miR-7039-5p

Accession MIMAT0027982
Description Mus musculus mmu-miR-7039-5p mature miRNA
Sequence 6 - AGAGGGAUGGAGAGCAUCGCGU - 27
Evidence experimental
meta-analysis [1]

Mature mmu-miR-7039-3p

Accession MIMAT0027983
Description Mus musculus mmu-miR-7039-3p mature miRNA
Sequence 64 - CCUGUUCUGCCCUCCCUUCCAG - 85
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645