miRBase entry: mmu-mir-7078

Stem-loop mmu-mir-7078


Accession
MI0022928
Symbol
MGI: Mir7078
Description
Mus musculus mmu-mir-7078 precursor miRNA


Sequence

121 reads, 5 reads per million, 38 experiments
cagggUGUGGGUGGUAGGAGACGCUggcugguauuugaccaggUACUUUUUUUAUCAUCCACAG
.....((((((((((((((((.(.((.(((((.....))))).))).)))))))))))))))).

Structure
caggg                C C  g     a 
     UGUGGGUGGUAGGAGA G Ug cuggu u
     |||||||||||||||| | || ||||| u
     ACACCUACUAUUUUUU C AU gacca u
----G                U -  g     g 


Annotation confidence Not enough data
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Genome context
chr8: 117459265-117459328 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-7078
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-7078-5p

Accession MIMAT0028062
Description Mus musculus mmu-miR-7078-5p mature miRNA
Sequence 6 - UGUGGGUGGUAGGAGACGCU - 25
Evidence experimental
meta-analysis [1]

Mature mmu-miR-7078-3p

Accession MIMAT0028063
Description Mus musculus mmu-miR-7078-3p mature miRNA
Sequence 44 - UACUUUUUUUAUCAUCCACAG - 64
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645