Stem-loop ddi-mir-7095

Accession

MI0022946

Description

Dictyostelium discoideum ddi-mir-7095 precursor miRNA

Sequence

aaacucaaauauucauuuuuuUUCCAUUUUUAACAGAUACAAaacaaaauaauaguagagguuuaauuaaaccuaaaauucagaauaaaauucagguucaauuauacaccuauaguuauuuuguuuuGGAUCUGUUAAAAUUGGAUAAaaaaugauuuuuuuuaguu
.((((.(((...(((((((((.((((.((((((((((..((((((((((((((.((((..((.(((((.(((((..((((........)))).))))).))))).))..)))).))))))))))))))..)))))))))).)))).)))))))))....))).))))

Structure

a    c   -uau         U    U          UA              a    ag  u     a     aa    cag 
 aacu aaa    ucauuuuuu UCCA UUUUAACAGA  CAAaacaaaauaau guag  gu uaauu aaccu  aauu   a
 |||| |||    ||||||||| |||| ||||||||||  |||||||||||||| ||||  || ||||| |||||  ||||    
 uuga uuu    aguaaaaAA AGGU AAAAUUGUCU  Guuuuguuuuauug uauc  ca auuaa uugga  uuaa   a
-    u   uuuu         U    U          AG              a    ca  u     c     -c    aau 

Annotation confidence Not enough data

Genome context

DDB0232429: 2890053-2890219 [-]

Mature ddi-miR-7095-5p

• Accession: MIMAT0028097
• Description: Dictyostelium discoideum ddi-miR-7095-5p mature miRNA
• Sequence: 22 - UUCCAUUUUUAACAGAUACAA - 42
• Evidence: experimental ; SOLiD [1]

Mature ddi-miR-7095-3p

• Accession: MIMAT0028098
• Description: Dictyostelium discoideum ddi-miR-7095-3p mature miRNA
• Sequence: 128 - GGAUCUGUUAAAAUUGGAUAA - 148
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 22875808
   MicroRNAs in Amoebozoa: deep sequencing of the small RNA population in the social amoeba Dictyostelium discoideum reveals developmentally regulated microRNAs
   "Avesson L, Reimegard J, Wagner EG, Soderbom F"
   "RNA (2012) 18:1771-1782