miRBase entry: mdm-MIR156m

Stem-loop mdm-MIR156m


Accession
MI0022983
Description
Malus domestica mdm-MIR156m precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
14 open access papers mention mdm-MIR156m
(299 sentences)

Sequence

aggguaaaggacggUGACAGAAGAGAGUGAGCACacaugguauuuucuugcaugcuggguucaugcuugaagcuuugugugcuuacucucuaucuguccacccaccucucucu
((((...(((..(((((((((((((((((((((((((.(((...(((..(((((.......)))))..)))))).)))))))))))))))).))))).))))..)))..))))

Structure
    uaa   ac    -     -                u   auu   uu     cu 
aggg   agg  ggUG ACAGA AGAGAGUGAGCACaca ggu   uuc  gcaug  g
||||   |||  |||| ||||| |||||||||||||||| |||   |||  |||||  g
ucuc   ucc  ccac ugucu ucucucauucgugugu ucg   aag  cguac  g
    -uc   ac    c     a                u   ---   uu     uu 


Annotation confidence Not enough data
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Genome context
MDC013580.195: 17840-17952 [-]

Database links

Mature mdm-miR156m

Accession MIMAT0025879
Description Malus domestica mdm-miR156m mature miRNA
Sequence 15 - UGACAGAAGAGAGUGAGCAC - 34
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47