miRBase entry: mdm-MIR156u

Stem-loop mdm-MIR156u


Accession
MI0022991
Description
Malus domestica mdm-MIR156u precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
14 open access papers mention mdm-MIR156u
(299 sentences)

Sequence

augUUGACAGAAGAGAGAGAGCACaacccgccaucggcuaaggagagucuuuacguugcugggagugugcuuucucuucuucugucaucau
(((.(((((((((((((((((((((.(.(.(((.((((((((((...)))))).)))).)))).)))))))))))).)))))))))).)))

Structure
   U          -           a c g   u    -      g 
aug UGACAGAAGA GAGAGAGCACa c c cca cggc uaagga  
||| |||||||||| ||||||||||| | | ||| |||| |||||| a
uac acugucuucu cucuuucgugu g g ggu guug auuucu  
   u          u           - a -   c    c      g 


Annotation confidence Not enough data
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Genome context
MDC008280.307: 1-91 [+]

Database links

Mature mdm-miR156u

Accession MIMAT0025887
Description Malus domestica mdm-miR156u mature miRNA
Sequence 4 - UUGACAGAAGAGAGAGAGCAC - 24
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47