Stem-loop cme-MIR160a

Accession

MI0023176

Description

Cucumis melo cme-MIR160a precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

1 open access papers mention cme-MIR160a
(1 sentences)

Sequence

guguguaugUGCCUGGCUCCCUGUAUGCCAuuuguagagcucaucagaauccgaugggccuccgcagauggcguaugaggagccaugcauauaucuuaa
....((((((((.(((((((.((((((((((((((.(((((((((.......)))))).))).)))))))))))))).))))))).)))))))).....

Structure

-gugu        C       C              a   -      ag 
     guaugUGC UGGCUCC UGUAUGCCAuuugu gag cucauc  a
     |||||||| ||||||| |||||||||||||| ||| ||||||  a
     uauauacg accgagg guaugcgguagacg cuc ggguag  u
aauuc        u       a              c   c      cc 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR160a

• Accession: MIMAT0026072
• Description: Cucumis melo cme-miR160a mature miRNA
• Sequence: 10 - UGCCUGGCUCCCUGUAUGCCA - 30
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877