Stem-loop cme-MIR169s

Accession

MI0023178

Description

Cucumis melo cme-MIR169s precursor miRNA

Gene family

MIPF0001712; MIR169_8

Literature search

1 open access papers mention cme-MIR169s
(1 sentences)

Sequence

guuuuauuuggUGAGCCAAAGAUGACUUGCCUuaauauaagaaacguauauaaaugggagagcuucaaguauauaggaagcucuuauuguuucauauuuaaguuggcaaguuaucuuuggcuuacuucauaaac
..(((((..((((((((((((((((((((((.....(((.((((((...........(((((((((..........)))))))))..)))))).))).......))))))))))))))))))))))..))))).

Structure

gu     uu                      --Uuaau   a      uauauaaaugg         aagu 
  uuuau  ggUGAGCCAAAGAUGACUUGCC       aua gaaacg           gagagcuuc    a
  |||||  ||||||||||||||||||||||       ||| ||||||           |||||||||     
  aaaua  ucauucgguuucuauugaacgg       uau cuuugu           uucucgaag    u
-c     cu                      uugaauu   a      ---------ua         gaua 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR169s

• Accession: MIMAT0026074
• Description: Cucumis melo cme-miR169s mature miRNA
• Sequence: 12 - UGAGCCAAAGAUGACUUGCCU - 32
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877