Stem-loop cme-MIR399f

Accession

MI0023191

Description

Cucumis melo cme-MIR399f precursor miRNA

Gene family

MIPF0000015; MIR399

Sequence

ggcagggcaauucuccuuuggcaaaaaugcauaaacacaaauacauuuauauaaaugcauuuuuuuuuuuuuuaaaagaaaagagugacuguuguuucauucauguuguUGCCAAAGGAGAAUUGCACugucauu
(((((.((((((((((((((((((..(((.(((((((((....(((((....)))))(((((((((((((....)))))))))))))..)).))))).)).)))....)))))))))))))))))).)))))...

Structure

---     g                  --aa   c  -     -  aauacauuuauauaaaug             u 
   ggcag gcaauucuccuuuggcaa    aug au aaaca ca                  cauuuuuuuuuuu u
   ||||| ||||||||||||||||||    ||| || ||||| ||                  |||||||||||||  
   cuguC CGUUAAGAGGAAACCGUu    uac ua uuugu gu                  gugagaaaagaaa u
uua     A                  guug   u  c     u  ----------------ca             a 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR399f

• Accession: MIMAT0026087
• Description: Cucumis melo cme-miR399f mature miRNA
• Sequence: 110 - UGCCAAAGGAGAAUUGCAC - 128
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877