miRBase entry: cme-MIR166i

Stem-loop cme-MIR166i


Accession
MI0023195
Description
Cucumis melo cme-MIR166i precursor miRNA
Gene family
MIPF0000004; MIR166

Literature search
1 open access papers mention cme-MIR166i
(5 sentences)

Sequence

ugaggagaauggaaacugguucgagaacguuuguauggaugaacauaaaaagagagucuuucauccgaacgaucUCGGACCAGGCUUCAUUCUCgccagcu
((..(((((((((..(((((((((((.((((((.(((((.((...(......)...)).))))).)))))).)))))))))))..)))))))))..))...

Structure
---  ag         aa           a      u     u  aca aa 
   ug  gagaaugga  cugguucgaga cguuug augga ga   u  a
   ||  |||||||||  ||||||||||| |||||| ||||| ||   |   
   ac  CUCUUACUU  GACCAGGCUcu gcaagc uacuu cu   a  a
ucg  cg         CG           a      c     u  gag ga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cme-miR166i

Accession MIMAT0026091
Description Cucumis melo cme-miR166i mature miRNA
Sequence 75 - UCGGACCAGGCUUCAUUCUC - 94
Evidence not_experimental

References

  1. PubMed ID: 22753475
    The genome of melon (Cucumis melo L.)
    "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
    "Proc Natl Acad Sci U S A (2012) 109:11872-11877