Stem-loop cme-MIR477b

Accession

MI0023206

Description

Cucumis melo cme-MIR477b precursor miRNA

Gene family

MIPF0000216; MIR477

Sequence

uuccuuuugcuuuCUCUCCCUCAAAGGCUUCUGgcaacaaugacauucgaacguaauuuguuguauucacguaugucugaggccuuaggggagaguacgugaaag
...(((((((...((((((((..((((((((.((((((..(((......((((.....))))....))).)).)))).)))))))).))))))))...)))))))

Structure

uuc       uuu        CA        U    -  aa   cauucg    u 
   cuuuugc   CUCUCCCU  AAGGCUUC Ggca ac  uga      aacg a
   |||||||   ||||||||  |||||||| |||| ||  |||      |||| a
   gaaagug   gagagggg  uuccggag cugu ug  acu      uugu u
---       cau        -a        u    a  -c   --uaug    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR477b

• Accession: MIMAT0026102
• Description: Cucumis melo cme-miR477b mature miRNA
• Sequence: 14 - CUCUCCCUCAAAGGCUUCUG - 33
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877