miRBase entry: cme-MIR167b

Stem-loop cme-MIR167b


Accession
MI0023217
Description
Cucumis melo cme-MIR167b precursor miRNA
Gene family
MIPF0000023; MIR167_1

Literature search
1 open access papers mention cme-MIR167b
(1 sentences)

Sequence

caccagcaguUGAAGCUGCCAGCAUGAUCUAaacuucuucuugcucuucacucaagccaaggaaagaucagaucauaugguagcuucaccuuuugaug
...(((.((.(((((((((((..(((((((...(((.((((((((.........)).)))))))))...))))))).))))))))))).)).)))...

Structure
cac   c  u           GC       Aaa   c      -  cuu 
   cag ag UGAAGCUGCCA  AUGAUCU   cuu uucuug cu   c
   ||| || |||||||||||  |||||||   ||| |||||| ||   a
   guu uc acuucgauggu  uacuaga   gaa aggaac ga   c
gua   u  c           -a       cua   -      c  acu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cme-miR167b

Accession MIMAT0026113
Description Cucumis melo cme-miR167b mature miRNA
Sequence 11 - UGAAGCUGCCAGCAUGAUCUA - 31
Evidence not_experimental

References

  1. PubMed ID: 22753475
    The genome of melon (Cucumis melo L.)
    "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
    "Proc Natl Acad Sci U S A (2012) 109:11872-11877