Stem-loop cme-MIR169e

Accession

MI0023221

Description

Cucumis melo cme-MIR169e precursor miRNA

Gene family

MIPF0000012; MIR169_1

Literature search

1 open access papers mention cme-MIR169e
(1 sentences)

Sequence

gguaauguugUAGCCAAGGAUGACUUGCCUGcauauaacuaauaauacaaagagaaagaaagagagaggggucgaggaaacuguugucgauugguuuuuguaggcagucuccuuggcuaauaucaaacc
(((...((..((((((((((.((((.(((((((...(((((((...((((..((.......((........)).......)).))))..)))))))..)))))))))))))))))))))..))...)))

Structure

   aau  ug          U    U       uau       aau    ag  aaagaaa  gag 
ggu   gu  UAGCCAAGGA GACU GCCUGca   aacuaau   acaa  ag       ga   a
|||   ||  |||||||||| |||| |||||||   |||||||   ||||  ||       ||    
cca   ua  aucgguuccu cuga cggaugu   uugguua   uguu  uc       cu   g
   aac  ua          -    -       -uu       -gc    -g  aaaggag  ggg 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR169e

• Accession: MIMAT0026117
• Description: Cucumis melo cme-miR169e mature miRNA
• Sequence: 11 - UAGCCAAGGAUGACUUGCCUG - 31
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877