Stem-loop cme-MIR171d

Accession

MI0023226

Description

Cucumis melo cme-MIR171d precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

1 open access papers mention cme-MIR171d
(1 sentences)

Sequence

ggaacgagauguugguccgguucaauaagaaaguagugcucuguuuaacuuggguucuucuuuuuuuaUUGAGCCGUGCCAAUAUCACGuguuguauu
...(((.(((((((((.((((((((((((((((.((.((((..........)))).))..)))))))))))))))).))))))))).)))........

Structure

-----gga   a         c                -u  u    uguu 
        acg gauguuggu cgguucaauaagaaag  ag gcuc    u
        ||| ||||||||| ||||||||||||||||  || ||||     
        uGC CUAUAACCG GCCGAGUUauuuuuuu  uc uggg    a
uuauguug   A         U                cu  u    uuca 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR171d

• Accession: MIMAT0026122
• Description: Cucumis melo cme-miR171d mature miRNA
• Sequence: 69 - UUGAGCCGUGCCAAUAUCACG - 89
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877