Stem-loop cme-MIR172b

Accession

MI0023228

Description

Cucumis melo cme-MIR172b precursor miRNA

Gene family

MIPF0000035; MIR172

Sequence

gcugguguagcauuaucaagauucacauucaaauguguuggggcuacauuauuccugcacauuucuuugcaacugAGAAUCUUGAUGAUGCUGCAUcggcaauuaa
((((((((((((((((((((((((.(((((((((((((.((((........)))).))))))....))).)).)).))))))))))))))))))))))))......

Structure

------                        a  -  -   ----      u    cua 
      gcugguguagcauuaucaagauuc ca uu caa    augugu gggg   c
      |||||||||||||||||||||||| || || |||    |||||| ||||    
      cggcUACGUCGUAGUAGUUCUAAG gu aa guu    uacacg ccuu   a
aauuaa                        A  c  c   ucuu      u    auu 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR172b

• Accession: MIMAT0026124
• Description: Cucumis melo cme-miR172b mature miRNA
• Sequence: 76 - AGAAUCUUGAUGAUGCUGCAU - 96
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877