Stem-loop cme-MIR172e

Accession

MI0023230

Description

Cucumis melo cme-MIR172e precursor miRNA

Gene family

MIPF0000035; MIR172

Sequence

gcuauugcugcaucuucaagauucacaaguuuuuuuuuucuuguuugcccuaaacccccuugAGAAUCUUGAUGAUGCUGCAGuggcaauua
((((((((.(((((.(((((((((.((((.............................)))).))))))))).))))).)))))))).....

Structure

-----        u     u         a    uuuuuuuuuucuu 
     gcuauugc gcauc ucaagauuc caag             g
     |||||||| ||||| ||||||||| ||||             u
     cgguGACG CGUAG AGUUCUAAG guuc             u
auuaa        U     U         A    ccccaaaucccgu 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR172e

• Accession: MIMAT0026126
• Description: Cucumis melo cme-miR172e mature miRNA
• Sequence: 63 - AGAAUCUUGAUGAUGCUGCAG - 83
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877