Stem-loop cme-MIR390a

Accession

MI0023238

Description

Cucumis melo cme-MIR390a precursor miRNA

Gene family

MIPF0000101; MIR390

Literature search

1 open access papers mention cme-MIR390a
(7 sentences)

Sequence

agaaucuguaAAGCUCAGGAGGGAUAGCGCCaccaaauauaagaaagauuacccgaauauauucauuuucgucgcccugcuuuccggcgcuaucuauccugaguuucauggcuucu
((((.((((.((((((((((.((((((((((...........(((((......((((..........))))........))))).)))))))))).)))))))))).)))).))))

Structure

    u    a          G          accaaauauaa     --auuacc    uaua 
agaa cugu AAGCUCAGGA GGAUAGCGCC           gaaag        cgaa    u
|||| |||| |||||||||| ||||||||||           |||||        ||||     
ucuu ggua uuugaguccu ucuaucgcgg           cuuuc        gcuu    u
    c    c          a          ----------c     gucccgcu    uuac 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR390a

• Accession: MIMAT0026134
• Description: Cucumis melo cme-miR390a mature miRNA
• Sequence: 11 - AAGCUCAGGAGGGAUAGCGCC - 31
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877