Stem-loop cme-MIR393a

Accession

MI0023240

Description

Cucumis melo cme-MIR393a precursor miRNA

Gene family

MIPF0000083; MIR393

Sequence

gaggaagcaUCCAAAGGGAUCGCAUUGAUCccaacuuauauauuuacaguuuucuuuucauuuucuuucuucuacauaauuuuggaucaugcuaucccuucggauuccuccuuu
(((((...((((.(((((((.((((.(((((.((.((((....................................)))).)).))))))))).))))))).)))))))))....

Structure

----     agc    A       C    U     c  c    auauuuacaguuuucuu 
    gagga   aUCC AAGGGAU GCAU GAUCc aa uuau                 u
    |||||   |||| ||||||| |||| ||||| || ||||                  
    cuccu   uagg uucccua cgua cuagg uu aaua                 u
uuuc     ---    c       u    -     u  u    caucuucuuucuuuuac 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR393a

• Accession: MIMAT0026136
• Description: Cucumis melo cme-miR393a mature miRNA
• Sequence: 10 - UCCAAAGGGAUCGCAUUGAUC - 30
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877