miRBase entry: cme-MIR393c

Stem-loop cme-MIR393c


Accession
MI0023242
Description
Cucumis melo cme-MIR393c precursor miRNA
Gene family
MIPF0000083; MIR393


Sequence

gguggagaguUCCAAAGGGAUCGCAUUGAUCcaauguucgucuugucuuauuggugauguuggagugaucaauucccaaucgauuauuggaucgugcgaucccuuaggaaucuuccauc
(((((((.(((((.((((((((((((.(((((((((.(((..(((....((((((.((......)).))))))...))).))).))))))))))))))))))))).))))).)))))))

Structure
       a     A            U         u   uc   ucuu      g  gu 
gguggag guUCC AAGGGAUCGCAU GAUCcaaug ucg  uug    auuggu au  u
||||||| ||||| |||||||||||| ||||||||| |||  |||    |||||| ||   
cuaccuu uaagg uucccuagcgug cuagguuau agc  aac    uaacua ug  g
       c     a            -         u   -u   -ccu      g  ag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cme-miR393c

Accession MIMAT0026138
Description Cucumis melo cme-miR393c mature miRNA
Sequence 11 - UCCAAAGGGAUCGCAUUGAUC - 31
Evidence not_experimental

References

  1. PubMed ID: 22753475
    The genome of melon (Cucumis melo L.)
    "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
    "Proc Natl Acad Sci U S A (2012) 109:11872-11877