miRBase entry: cme-MIR394b

Stem-loop cme-MIR394b


Accession
MI0023243
Description
Cucumis melo cme-MIR394b precursor miRNA
Gene family
MIPF0000100; MIR394


Sequence

uagaguuuaUUGGCAUUCUGUCCACCUCCccuccuuucuucaaaucuuuuuauucaaauuuuuugguuuuuguuuuuuuuuuuuuuuauuaaagaaaauuuauuuauaauauagggggaggugggcauacugccaacugaguucug
(((((((((((((((...((((((((((((((.........(((((..................)))))..(((((((((..(....)..)))))))))..............))))))))))))))...)))))).)))))))))

Structure
         -      UUC              ccuuucuucaaaucuuuuuauucaaauuuuuugguuuuu         uu u 
uagaguuua UUGGCA   UGUCCACCUCCccu                                       guuuuuuuu  u u
||||||||| ||||||   ||||||||||||||                                       |||||||||  |  
gucuugagu aaccgu   acggguggaggggg                                       uaaaagaaa  a u
         c      cau              -------------------------auauaauauuuauu         uu u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cme-miR394b

Accession MIMAT0026139
Description Cucumis melo cme-miR394b mature miRNA
Sequence 10 - UUGGCAUUCUGUCCACCUCC - 29
Evidence not_experimental

References

  1. PubMed ID: 22753475
    The genome of melon (Cucumis melo L.)
    "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
    "Proc Natl Acad Sci U S A (2012) 109:11872-11877