Stem-loop cme-MIR396c

Accession

MI0023250

Description

Cucumis melo cme-MIR396c precursor miRNA

Gene family

MIPF0000047; MIR396

Sequence

ggccauguuuUUCCACAGCUUUCUUGAACUUcuucccauucucaccaacaaauuacaauaaucucaaauuguaauuuuuguaacauacuucgaauaagcucaagauagcugugggaaaucauguca
(((.(((.((((((((((((.((((((.(((.(((..........(((.((((((((((........)))))))))))))...........))).))).)))))).)))))))))))).)))))).

Structure

-   c   u            U      A   c   -ccauucucac   c          aau 
 ggc aug uuUUCCACAGCU UCUUGA CUU uuc           caa aaauuacaau   c
 ||| ||| |||||||||||| |||||| ||| |||           ||| ||||||||||    
 cug uac aaagggugucga agaacu gaa aag           guu uuuaauguua   u
a   -   u            u      c   u   cuucauacaau   -          aac 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR396c

• Accession: MIMAT0026146
• Description: Cucumis melo cme-miR396c mature miRNA
• Sequence: 11 - UUCCACAGCUUUCUUGAACUU - 31
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877