Stem-loop cme-MIR397

Accession

MI0023252

Description

Cucumis melo cme-MIR397 precursor miRNA

Gene family

MIPF0000120; MIR397

Sequence

gaaagauacgUCAUUGAGUGCAGCGUUGAUGucgaaacuuauuucaaaguucuaacuuuucucaucagcgcuucauucaaucacguuucuucc
..((((.((((.((((((((.((((((((((..(((((((......))))........))).)))))))))).)))))))).)))).))))..

Structure

ga    u    C        C          uc   --------    au 
  aaga acgU AUUGAGUG AGCGUUGAUG  gaa        acuu  u
  |||| |||| |||||||| ||||||||||  |||        ||||   
  uucu ugca uaacuuac ucgcgacuac  cuu        ugaa  u
cc    u    c        u          -u   uucaaucu    ac 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR397

• Accession: MIMAT0026148
• Description: Cucumis melo cme-miR397 mature miRNA
• Sequence: 11 - UCAUUGAGUGCAGCGUUGAUG - 31
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877