Stem-loop cme-MIR399a

Accession

MI0023254

Description

Cucumis melo cme-MIR399a precursor miRNA

Gene family

MIPF0000015; MIR399

Sequence

auuacugggcaauuacucuuuuggcagauauguuaugcaugcucuugaugacuuaugugucaagaagcauacuugcuaacUGCCAAAGGAGAUUUGCCCCGcaauauucuc
......((((((.(.((((((((((((.((.((.....(((((((((((.((....)))))))).)))))....)))).))))))))))))).))))))............

Structure

------auuacu      u a            a  u  uaugc     -      g  u 
            gggcaa u cucuuuuggcag ua gu     augcu cuugau ac u
            |||||| | |||||||||||| || ||     ||||| |||||| ||  
            CCCGUU A GAGGAAACCGUc au cg     uacga gaacug ug a
cucuuauaacGC      U -            a  -  -uuca     a      -  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR399a

• Accession: MIMAT0026150
• Description: Cucumis melo cme-miR399a mature miRNA
• Sequence: 81 - UGCCAAAGGAGAUUUGCCCCG - 101
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877