Stem-loop cme-MIR399c

Accession

MI0023256

Description

Cucumis melo cme-MIR399c precursor miRNA

Gene family

MIPF0000015; MIR399

Sequence

auuucugggcaauuacuccauuggcaguugccaccuuccuuuuaaaacacacacacacugacacauacauauauauauauuauauauuaugugaaaucauauugccaaauuuaaggcaauaacaaaaucgcuacUGCCAAAGGAGAUUUGCCCGGuaaugcucc
(((.((((((((.(.((((.((((((((.((..............................((((((.(((((((.....)))))))))))))......(((((((........)))))))........)).)))))))).))))).)))))))).))).....

Structure

-----   u        u a    a        u  ------caccuuccuuuuaaaacacacacacacuga      c       u 
     auu cugggcaa u cucc uuggcagu gc                                    cacaua auauaua a
     ||| |||||||| | |||| |||||||| ||                                    |||||| ||||||| u
     uaa GGCCCGUU A GAGG AACCGUca cg                                    guguau uauauau a
ccucg   u        U -    A        u  cuaaaacaauaacggaauuuaaaccguuauacuaaa      -       u 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR399c

• Accession: MIMAT0026152
• Description: Cucumis melo cme-miR399c mature miRNA
• Sequence: 135 - UGCCAAAGGAGAUUUGCCCGG - 155
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877